Job Description P0A991 Confidence 93.31% Date Thu Jan 5 11:09:38 GMT 2012 Rank 214 Aligned Residues 117 % Identity 15% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		V	E	Q	A	F	N	M	G	A	V	A	V	G	A	T	I	Y	F	.	.	.	.	.	.	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																														.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	.	.	V	H	E	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	C	Q
Template Known Secondary structure									T									S			T	T	S		T	T	S				S																								.	.			S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.																		.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	T	I	G	A	D	I	V	K	Q	K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A
Query Conservation
Alig confidence							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		P	V	A	E	V	.	C	D	V	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	.	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F
Template Known Secondary structure							.		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	T	T												.										T	T	S		G	G	G
Template Predicted Secondary structure							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		100	.	.	.	.		.	.	.	.	.	110																											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		307	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	K	R	A	G	G	M	G	L	I	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	E	A	G	N	G	K	L	I	L
Template Known Secondary structure		.	.	.			T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					152	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions