Job Description P0A991 Confidence 98.10% Date Thu Jan 5 11:09:38 GMT 2012 Rank 48 Aligned Residues 189 % Identity 15% Template c3qc3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.														110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	L	G	A	E	C	L	R	X	L	D	S	G	A	D	Y	L	H	L	D	V	X	D	G	H	F	V	P	N	I	T	F	G	H	P	V	V	E	S	L	R	K	Q	L	G	Q	D	P	F	F	D	X	H	X	X	V	S	K	P	E	Q	W	.	.	.	.	.	.	.	.	.	.	.	V	K	P	X	A	V
Template Known Secondary structure		G	G											T	T		S								B	S	S	S	S	S		B																S	S	S									S						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	A	V	A	V	G	A	T	I	Y	F	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V	K	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	N	Q	Y	T	F	H	L	E	A	T	E	N	.	.	.	.	.	.	.	.	P	G	A	L	I	K	D	I	R	E	N	G	X	K	V	G	L	A	I	K	P	G	T	S	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	A	P	W	A	N	Q	I	D	X	A	L	V	X	T
Template Known Secondary structure			T		S						G	G	G		S		.	.	.	.	.	.	.	.											T	T									T	T	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	T	T	G	G	G	S	S						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	.	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G	M	G	L
Query Conservation																																														.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.														.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Sequence		V	E	P	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	K	F	X	E	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	E	V	D	G	G	V	G	P	D	.	.	.	.	.	.	.	.	.	T	V	H	K	C	A	E	A	G	A	N	X	I
Template Known Secondary structure		S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					G	G	G												T	T							S	S		S	T	T	.	.	.	.	.	.	.	.	.	T								T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.																				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q	D	V	Y	L	D
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		V	S	G	S	A	I	X	R	S	E	D	P	R	.	.	S	V	I	N	L	L	R	N	V	C	S	E
Template Known Secondary structure									T		S				.	.
Template Predicted Secondary structure															.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions