Return to main results Retrieve Phyre Job Id

Job DescriptionP0A991
Confidence96.74%DateThu Jan 5 11:09:38 GMT 2012
Rank128Aligned Residues183
% Identity22%Templatec3noeA_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa
Resolution2.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110. ........120.........130.........140.........150.........160
Predicted Secondary structure 



..............






















Query SS confidence 
















. . . . . . . . . . . . . .
















































Query Sequence  KNIVELAIEAGCNCVAS. . . . . . . . . . . . . . TYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
Query Conservation     
  




 

 
 ..............  

       
   
 





  


  
    
 

 








Alig confidence 
















..............


























........













Template Conservation     
  

  

 

   




   

  

  
             

 

   
 ........   
  
  
   
Template Sequence  AKLVDFHLQDGTNAIVAVGTTGESATLDVEEHIQVVRRVVDQVKGRIPVIAGTGANST. . . . . . . . REAVALTEAAKSGG
Template Known Secondary structure  T
SSSTTTTGGG

TTSS



SS........TTT
Template Predicted Secondary structure 





















........

Template SS confidence 















































































   25....30.........40.........50.........60.........70.........80.. .......90......
 
   161...... ..170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 

.


























Query SS confidence 






.







































































Query Sequence  AVAVGAT. IYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQK
Query Conservation 





 .

 


 
  

 


 




   





  



  
     
 
 





 














 
Alig confidence 






.





















...















.......











.....






Template Conservation 

 
 
  
     
   
      

   ...  

 

  
   
  ....... 
   
  
   .....  
 


Template Sequence  ADACLLVTPYYNKPTQEGMYQHFRHIAEAV. . . AIPQILYNVPGRTSCD. . . . . . . MLPETVERLSKV. . . . . PNIIGIK
Template Known Secondary structure 
S


SS


S...
S

S

.......

TS.....TT
Template Predicted Secondary structure 











...










.......



.....

Template SS confidence 















































































   97..100.........110.........120...... ...130.........140.. .......150.... .....160.
 
   240. ........250.........260.........270.........280.........290.........300.........310........
Predicted Secondary structure 

.






































Query SS confidence 

.












































































Query Sequence  MA. ENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLI
Query Conservation 

.
  

   

                       
   
 
   






 
    
 
  
  

 

 


 


Alig confidence 

.










...........................


















...........








Template Conservation   
  
         ...........................       
  
 
      ...........
  
  
 
Template Sequence  EATGDLQRAKEVIE. . . . . . . . . . . . . . . . . . . . . . . . . . . RVGKDFLVYSGDDATAVEL. . . . . . . . . . . MLLGGKGNI
Template Known Secondary structure 
S

...........................S
TTS

TTT...........TT

Template Predicted Secondary structure 




...........................





...........


Template SS confidence 















































































   162.......170..... ....180.........190.... .....200...
 
   319320.........330.........340
Predicted Secondary structure 



Query SS confidence 





















Query Sequence  LGRKAFKKSMADGVKLINAVQD
Query Conservation 






   

 
 
  

  
Alig confidence 








..










Template Conservation         
 ..           
Template Sequence  SVTANVAPR. . AMSDLCAAAMR
Template Known Secondary structure  SGGGT
..
Template Predicted Secondary structure  ..
Template SS confidence 





















   204.....210.. .......220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions