|   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | K | N | I | V | E | L | A | I | E | A | G | C | N | C | V | A | S | T | Y | G | V | L | A | S | V | S | R | R | Y | A | H | R | I | P | F | L | V | K | L | N | H | N | E | T | L | S | Y | P | N | T | Y | D | Q | T | L | Y | A | S | V | E | Q | A | F | N | M | G | A | V | A | V | G | A | T | I | Y | F | G | S |
Query Conservation |   |
|
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |
| . |   | . | . |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |
Template Sequence |   |
Q | I | R | K | L | C | S | E | A | A | E | Y | K | F | A | S | V | C | V | N | P | T | W | V | P | L | C | A | E | L | L | K | G | T | . |
G | . |
. |
V | K | V | C | T | V | I | G | F | P | L | G | A | T | P | S | E | V | K | A | Y | E | T | K | V | A | V | E | Q | G | A | E | E | V | D | M | V | I | N | I | G | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  | T | T | T | S | . | S | . | . |
|  |  |  |  |  |  | S | T | T | T |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 240 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
E | E | S | R | R | Q | I | E | E | I | S | A | A | F | E | R | A | H | E | L | G | M | V | T | V | L | W | A | Y | L | R | N | S | A | F | K | K | D | G | V | D | Y | H | V | S | A | D | L | T | G | Q | A | N | H | L | A | A | T | I | G | A | D | I | V | K | Q | . |
. |
. |
. |
. |
K | M | A | E | N | N |
Query Conservation |   |
. | . | . |
|   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |   |
|
|
|   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |
Template Sequence |   |
V | K | A | K | K | Y | D | D | V | E | K | D | V | K | A | V | V | D | A | S | G | K | A | L | T | K | V | I | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | C | Y | L | T | N | E | E | K | V | E | V | C | K | R | C | V | A | A | G | A | E | Y | V | K | T | S | T | G | F | G | T | H | G | A | T | P |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
|
|
| S | S | S | S |
|
|
|
|  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | Y | K | A | I | N | Y | G | Y | T | D | D | R | V | Y | S | K | L | T | S | E | N | P | I | D | L | V | R | Y | Q | L | A | N | C | Y | M | G | R | A | G | L | I | N | S | G | G | A | A | G | G | E | T | D | L | S | D | A | V | R |
Query Conservation |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|
|
| . |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
E | D | V | K | L | M | K | D | T | V | G | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | L | V | K | A | A | G | G | I | R | T | . |
F | D | D | A | M | K | M | I | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  | S | S |
|
| S | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | |
. | . | . | . | . | . | . | . | . |
  |