Job Description P0A991 Confidence 26.29% Date Thu Jan 5 11:09:38 GMT 2012 Rank 469 Aligned Residues 103 % Identity 14% Template c3n2bD_ PDB info PDB header:lyase Chain: D: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of diaminopimelate2 decarboxylase (lysa) from vibrio cholerae. Resolution 1.80 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.													140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	.	.	.	.	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F
Query Conservation																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	A	E	M	K	R	A	L	Q	L	K	I	K	C	F	N	V	E	S	E	P	E	L	Q	R	L	N	K	V	A	G	E	L	G	V	K	A	P	I	S	L	R	I	N	P	D	V	D	A	K	T	H	P	Y	I	S	T	G	L	R	D	N	K	F	G	I	T	F	D	R	A	A	Q	V	Y	R	L	A	H
Template Known Secondary structure												T	T		S						S															T									B						T	T	T											S	S		S	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		158	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure				.																	.	.	.	.	.
Query SS confidence				.																	.	.	.	.	.
Query Sequence		N	M	.	G	A	V	A	V	G	A	T	I	Y	F	G	S	E	E	S	.	.	.	.	.	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T
Query Conservation				.																	.	.	.	.	.
Alig confidence				.																	.	.	.	.	.
Template Conservation
Template Sequence		S	L	P	N	L	D	V	H	G	I	D	C	H	I	G	S	Q	L	T	A	L	A	P	F	I	D	A	T	D	R	L	L	A	L	I	D	S	L	K	A	E	G	I	H	I
Template Known Secondary structure			S	T	T																S																					T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions