 |
Job Description | P0A991 | Confidence | 48.65% | Date | Thu Jan 5 11:09:38 GMT 2012 |
Rank | 404 | Aligned Residues | 85 |
% Identity | 12% | Template | c3lmzA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:putative sugar isomerase; |
PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution
|
Resolution | 1.44 Å |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | Q | A | F | N | M | G | A | V | A | V | G | A | T | I | Y | F | G | S | E | E | S | R | R | Q | I | E | E | I | S | A | A | F | E | R | A | H | E | L | G | M | V | T | V | L | W | A | Y | L | R | N | S | A | F | K | K | D | G | V | D | Y | H | V | S | A | D | L | T | G | Q | A | N | H | L | A | A | T | I | G |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
Template Sequence |   |
L | K | T | L | E | R | L | D | I | H | Y | L | C | I | . |
. |
K | D | F | H | L | P | L | N | S | T | D | E | Q | I | R | A | F | H | D | K | C | A | A | H | K | V | T | G | Y | A | V | G | P | I | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
X | K | S | E | E | E | I | D | R | A | F | D | Y | A | K | R | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|  |  |  |  | . | . |
| T | T | T | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | I | V | K | Q | K | M | A | E | N | N | G | G | Y | K | A | I | N | Y |
Query Conservation |   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   | . | . |   |
|   |
|   |   |   |   |   |
Template Sequence |   |
V | K | L | I | V | G | V | P | N | . |
. |
Y | E | L | L | P | Y | V | D | K |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |
| . | . | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|