Job Description P0A991 Confidence 97.35% Date Thu Jan 5 11:09:38 GMT 2012 Rank 90 Aligned Residues 181 % Identity 18% Template c3lerA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 Resolution 1.84 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	.	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N	M
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		A	R	L	I	K	R	Q	I	E	N	G	I	D	A	V	V	P	V	G	T	T	G	E	S	A	T	L	T	H	E	E	H	R	T	C	I	E	I	A	V	E	T	C	K	G	T	K	V	K	V	L	A	G	A	G	S	N	A	T	.	.	.	.	.	.	.	.	H	E	A	V	G	L	A	K	F	A	K	E	H
Template Known Secondary structure										T	T	T						T	T	S	T	T	T	T	G	G	G	S																	T	T	S	S										S	S		.	.	.	.	.	.	.	.													T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure													.																																		.	.
Query SS confidence													.																																		.	.
Query Sequence		G	A	V	A	V	G	A	T	I	Y	F	.	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	.	.	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V
Query Conservation													.																																		.	.
Alig confidence													.																				.	.	.												.	.						.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		G	A	D	G	I	L	S	V	A	P	Y	Y	N	K	P	T	Q	Q	G	L	Y	E	H	Y	K	A	I	A	Q	S	V	.	.	.	D	I	P	V	L	L	Y	N	V	P	G	R	T	G	C	E	I	S	.	.	.	.	.	.	.	.	.	.	.	.	T	D	T	I	I	K	L	F	R	D	.	C	E	N	I	Y
Template Known Secondary structure		T		S									S	S																			.	.	.	S	S												S					.	.	.	.	.	.	.	.	.	.	.	.											.		T	T
Template Predicted Secondary structure																																	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.													.	150	.	.	.	.	.	.	.	.		.	160	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G	M	G
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.							.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.							.	.	.
Template Sequence		G	V	E	A	S	G	N	I	D	K	C	V	D	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	P	R	X	X	L	I	S	G	E	D	.	.	.	.	.	.	.	.	A	I	N	Y	P	I	.	.	.	L	S	N	G	G	K	G
Template Known Secondary structure						S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	B						G	.	.	.	.	.	.	.	.	G	G					.	.	.			T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.							.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																													180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.				.	.	200	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q	D
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		V	I	S	V	T	S	N	L	L	P	D	.	.	X	I	S	A	L	T	H	F	A	L	D
Template Known Secondary structure					S	G	G	G	T				.	.											T
Template Predicted Secondary structure													.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions