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Job DescriptionP0A991
Confidence98.45%DateThu Jan 5 11:09:38 GMT 2012
Rank34Aligned Residues180
% Identity16%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110. ........120.........130.........140.........150........
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Query Sequence  FDPKNIVELAIEAGCNCVAS. . . . . . . . . . . . . TYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFN
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Template Sequence  ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA. GMDVHLMVKPVDAL. . . . . . . . . . . IESFAK
Template Known Secondary structure  GGTT


BSSSSS
B


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   16...20.........30.........40.........50.........60... ......70....... ..80...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  MGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQ
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Template Sequence  AGATSIVFHPEASEH. . . . . . . . IDRSLQLIKSFGIQAGLALNPATGIDCLK. . . . . . . . . . . . . . . . . YVESNIDRVLI
Template Known Secondary structure  T
S
GGG
S
........TTTS
TT

SGGGT.................TTGGG
S
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   84.....90........ .100.........110.........120....... ..130........
 
   239 240.........250.........260.........270.........280.........290.........300.........
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Query Sequence  K. . . . . . . . . MAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVIN
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Template Sequence  MSVNPGFQKFIPAMLDKAKEISKWISS. . . . . . . . . . . . . . . . . . . . . . . TDRDILLEIDGGVNPY. . . . . . . . . NIAEI
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S
TT




TT.......................TS

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   139140.........150.........160..... ....170.........180. .....
 
   310.........320.........330.........340..
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Query Sequence  KRAGGMGLILGRKAFKKSMADGVKLINAVQDVY
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Template Sequence  AVCGVNAFVAGSAIFNSDSYK. . QTIDKMRDEL
Template Known Secondary structure  TTT

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   189190.........200......... 210.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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