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Job DescriptionP0A991
Confidence97.03%DateThu Jan 5 11:09:38 GMT 2012
Rank108Aligned Residues166
% Identity21%Templatec3daqB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110. ........120.........130.........140.........150.........160
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Query Sequence  KNIVELAIEAGCNCVAS. . . . . . . . . . . . . . TYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
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Template Sequence  KAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDT. . . . . . . . EKSIQASIQAKALG
Template Known Secondary structure  TT

SSGGGTGGGS
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   27..30.........40.........50.........60.........70.........80.... .....90........
 
   161........170... ......180.........190.........200.........210.........220.........230.........
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Query Sequence  AVAVGATIYFGSE. ESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQK
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Template Sequence  ADAIMLITPYYNKTNQRGLVKHFEAIADAV. . . KLPVVLYNVPSRTNMT. . . . . . . IEPETVE. . . ILS. QHPY. IVALK
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   99100.........110.........120........ .130.........140.... .....150. ... .... .160...
 
   240. ........250.........260.........270.........280.........290.........300.........310........
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Query Sequence  MA. ENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLI
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Template Sequence  DATNDFEYLEEVKKRIDT. . . . . . . . . . . . . . . . . . . . . . . . . . NSFALYSGND. . . . . . . . DNVVEY. . . YQRGGQGVI
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G........GG...TT

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   164.....170.........180. ........190. ...... ..200......
 
   319320
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Query Sequence  LG
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Template Sequence  SV
Template Known Secondary structure  S
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   207.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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