Job Description P0A991 Confidence 97.71% Date Thu Jan 5 11:09:38 GMT 2012 Rank 72 Aligned Residues 181 % Identity 16% Template c3cprB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthetase; PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution Resolution 2.20 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N	M	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		R	E	V	A	A	Y	L	V	D	K	G	L	D	S	L	V	L	A	G	T	T	G	E	S	P	T	T	T	A	A	E	K	L	E	L	L	K	A	V	R	E	E	V	G	D	R	A	K	L	I	A	G	V	G	T	N	N	T	.	.	.	.	.	.	.	.	R	T	S	V	E	L	A	E	A	A	A	S	A	G
Template Known Secondary structure											T	T							S	S	T	T	T	T	T	T	T	S																	T	T	T	S									S	S		.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.	.	.	110	.
		161	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure															.																															.	.
Query SS confidence															.																															.	.
Query Sequence		A	V	A	V	G	A	T	I	Y	F	G	S	E	.	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	.	.	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V	K
Query Conservation															.																															.	.
Alig confidence															.																	.	.	.												.	.						.	.	.	.	.	.	.	.	.	.	.	.									.				.
Template Conservation																																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.				.
Template Sequence		A	D	G	L	L	V	V	T	P	Y	Y	S	K	P	S	Q	E	G	L	L	A	H	F	G	A	I	A	A	A	T	.	.	.	E	V	P	I	C	L	Y	D	I	P	G	R	S	G	I	P	I	E	.	.	.	.	.	.	.	.	.	.	.	.	S	D	T	M	R	R	L	S	.	E	L	P	.	T	I	L	A
Template Known Secondary structure			S									S	S																			.	.	.		S												S	S				.	.	.	.	.	.	.	.	.	.	.	.								T	.	T	S	T	.	T
Template Predicted Secondary structure																																.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.									.				.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.													160	.	.	.	.	.	.	.		.	.	170		.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G	M	G	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.											.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.											.	.	.	.	.	.	.
Template Sequence		V	D	A	K	G	D	L	V	A	A	T	S	L	I	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	L	A	W	Y	S	G	.	.	.	.	D	D	P	L	N	L	V	W	L	A	.	.	.	.	.	.	.	L	G	G	S	G	F
Template Known Secondary structure					S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B					.	.	.	.	S	G	G	G							.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																														.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q	D	V	Y	L	D	S	K
Query Conservation
Alig confidence									.	.	.			.	.	.
Template Conservation									.	.	.			.	.	.
Template Sequence		I	S	V	I	G	H	A	.	.	.	A	P	.	.	.	T	A	L	R	E	L	Y	T	S	F	E	E	G	D
Template Known Secondary structure				S	G	G	G	T	.	.	.			.	.	.												T	T
Template Predicted Secondary structure									.	.	.			.	.	.
Template SS confidence
		216	.	.	.	220	.	.				.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions