Job Description P0A991 Confidence 56.24% Date Thu Jan 5 11:09:38 GMT 2012 Rank 375 Aligned Residues 216 % Identity 13% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	A	S	.	.	.	.	.	.	.	.	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	.	.	.	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N	M	G	A	V	A
Query Conservation																			.	.	.	.	.	.	.	.																								.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																.								.	.	.								.	.	.	.	.
Template Conservation																																										.																		.	.	.	.	.
Template Sequence		R	E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	.	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	.	.	.	.	.	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A
Template Known Secondary structure												T		S																									S	S	S	.										T	T	S			T	T	S	.	.	.	.	.												T	S	S		S
Template Predicted Secondary structure																																										.																		.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	T	I	Y	F	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V	K	Q	K	M	A	E	N
Query Conservation
Alig confidence																							.	.	.	.	.	.								.	.										.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.								.	.										.	.	.	.	.	.	.	.
Template Sequence		L	G	I	N	C	S	L	G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	.	.	.	.	.	.	Y	T	D	K	F	L	V	.	.	V	E	P	N	A	G	Y	P	L	.	.	.	.	.	.	.	.	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	G	G	C	C	G	T	T
Template Known Secondary structure						S	S	S														T	.	.	.	.	.	.	T			S				.	.										.	.	.	.	.	.	.	.							T	T						T	T	T		S						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.								.	.										.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.														.	290	.	.	.					.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Query Sequence		N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	A	A	.	.	.	.	G	G	E	T	D	L	S	D	A	V	R	T	A
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	H	V	K	L	F	R	K	.	.	.	.	.	.	.	.	.	.	V	L	G	N	R	K	P	L	Q	R	K	K	K	R	I	F	A	V	S	S	P	S	K	L	V	T	F	D	H	F	V	V	I	G	E	R	I	N	P	A	G	R	K	K	L	W	A	E	M	Q	K	G	N	E	E	I	V	I	K	E	A
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.				S																	S	S					S	S	S											T	T										T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.											.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	I	N	K	R	A	G	G	M	G	L	I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	.	L	I	N	A	V	Q	D	V	Y
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		K	T	Q	V	E	K	G	A	E	V	L	D	V	N	F	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L	P	Y	V	S
Template Known Secondary structure							T	T		S							S	S	G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions