Job Description P0A991 Confidence 49.87% Date Thu Jan 5 11:09:38 GMT 2012 Rank 398 Aligned Residues 163 % Identity 16% Template c2xn1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase; PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris Resolution 2.30 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		I	L	P	V	D	Q	G	V	E	H	S	A	G	A	S	F	A	A	N	P	L	Y	F	D	P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	.	.	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q
Query Conservation																																										.	.
Alig confidence																									.	.	.	.	.	.	.											.	.																															.
Template Conservation																									.	.	.	.	.	.	.																																											.
Template Sequence		I	N	D	Y	N	F	K	W	K	L	N	P	N	E	E	F	Q	T	P	E	V	L	M	.	.	.	.	.	.	.	V	Y	S	D	Q	G	L	N	K	M	S	Q	A	F	H	S	L	I	H	E	R	I	M	R	S	K	F	K	D	Q	I	R	P	V	L	V	N	N	W	E	A	T	.	Y	F	D	F	N	E	D
Template Known Secondary structure					T	T							T	T											.	.	.	.	.	.	.				S	B																	T				T	T	T	T	S													.	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.																																											.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																									.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	Y	A	S	V	E	Q	A	F	N	M	G	A	V	A	V	G	A	T	I	Y	F	.	.	G	S	E	E	S	R	R	Q	I	E	E	.	.	.	.	.	.	.	.	.	.	.	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	K	T	I	V	D	K	A	K	K	L	G	L	E	M	F	V	L	D	D	G	W	F	G	H	R	D	D	D	N	S	S	L	G	D	W	K	V	Y	K	K	K	F	P	N	G	L	G	H	F	A	D	Y	V	H	E	Q	G	L	K	F	G	L	W	F	E	P	E	M	I	S	Y	E	S	N	L	Y	K	E
Template Known Secondary structure														T								T	T	S	B	T	T		S	S	T	T	S		T	T			S	B		T	T	T		T	T												T	T									T	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
										203	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.										.	.	.														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.										.	.	.														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	N	S	A	F	K	K	D	G	.	.	.	V	D	Y	H	V	S	A	D	L	T	G	Q	A	.	.	.	.	N	H	L	A	A	T	I	G	A	D	I	V	K	Q	K	M
Query Conservation		.	.	.	.	.	.	.	.										.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.										.	.	.														.	.	.	.
Template Conservation
Template Sequence		H	P	D	Y	L	M	H	V	P	G	R	K	P	C	P	S	R	N	Q	Y	V	L	E	L	G	R	K	E	V	R	D	N	I	F	E	Q	M	V	K	I	L	D	S	K	K	I	D	Y	I	K	W	D	M
Template Known Secondary structure			G	G	G	B				T	T	S					B	T	T	B			B		T	T	S																T	T	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions