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Job DescriptionP0A991
Confidence96.54%DateThu Jan 5 11:09:38 GMT 2012
Rank141Aligned Residues181
% Identity16%Templatec2w6rA_
PDB info PDB header:lyaseChain: A: PDB Molecule:imidazole glycerol phosphate synthase subunit PDBTitle: crystal structure of an artificial (ba)8-barrel protein2 designed from identical half barrels
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.. .......120 .........130.........140.........150.........160....
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Query Sequence  DPKNIVELAIEAGCNCVAST. YGVLASVS. . . . . . . RRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAV
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Template Sequence  LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKM. . . . . . . . . . EHFLEAFLAGADKA
Template Known Secondary structure  T
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   31........40.........50.........60.........70.........80...... ...90.........100
 
   165....170.........180.........190.........200... ......210.........220.........230.........240
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Query Sequence  GATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLR. . . . NSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
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Template Sequence  LA. . . . ASVFMREL. . . . . . . . KEYLKSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRD. WVVEVEKRGAGEILLT.
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   101. .......110 .........120.........130.........140.........150 .........160......
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILG
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Template Sequence  . . . . . . . . . . . . . . . . . SIDRDGTKSGYD. . TEMIRFVRPLTTLPIIASGGAGKM. . . . . EHFLEA. . . FLAGADAALAA
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   177..180........ .190.........200.........210.. ...... .220.........
 
   321...
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Query Sequence  RKAF
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Template Sequence  SVFH
Template Known Secondary structure  TTT
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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