Job Description P0A991 Confidence 96.62% Date Thu Jan 5 11:09:38 GMT 2012 Rank 137 Aligned Residues 190 % Identity 15% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N	M	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.
Template Sequence		S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	Y	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I	L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	T	.	.	.	.	.	.	.	.	D	E	A	V	A	L	A	K	D	A	E	A	A	G
Template Known Secondary structure											T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S		.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.									.	.	.	.	120	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		A	V	A	V	G	A	T	I	Y	F	.	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V	K	Q	K
Query Conservation												.
Alig confidence												.																					.	.	.																.	.	.	.	.	.	.							.	.	.
Template Conservation																																	.	.	.																.	.	.	.	.	.	.							.	.	.
Template Sequence		A	D	A	L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	.	.	.	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	.	.	.	.	.	.	.	F	S	D	E	L	L	.	.	.	V	R	L	A	Y	I	P	N	I	R	A	I	K	X	P
Template Known Secondary structure			S									S	S																			S	.	.	.	S								G	G	G	T				.	.	.	.	.	.	.							.	.	.					T	S	T	T
Template Predicted Secondary structure																																	.	.	.																.	.	.	.	.	.	.							.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G	M	G	L	I	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template Sequence		L	P	A	D	A	D	Y	A	G	E	L	A	R	L	R	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	D	F	A	I	G	Y	S	G	.	.	.	.	D	W	G	C	T	D	A	T	L	.	.	.	.	.	.	.	A	G	G	D	T	W	Y	S
Template Known Secondary structure				T	T											T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T								.	.	.	.										.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.																									.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.								.	.	.	.	.	.	240	.
		320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q	D	V	Y	L	D	S	K	I
Query Conservation			.
Alig confidence			.					.	.	.	.		.	.	.
Template Conservation								.	.	.	.		.	.	.
Template Sequence		V	V	A	G	L	L	.	.	.	.	P	.	.	.	V	P	A	L	Q	L	X	R	A	A	Q	A	G	N	A
Template Known Secondary structure		S	G	G	G	T		.	.	.	.		.	.	.												T	T
Template Predicted Secondary structure								.	.	.	.		.	.	.
Template SS confidence
		242	.	.	.	.	.					.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions