 |
Job Description | P0A991 | Confidence | 43.46% | Date | Thu Jan 5 11:09:38 GMT 2012 |
Rank | 413 | Aligned Residues | 82 |
% Identity | 13% | Template | c2ftpA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; |
PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa
|
Resolution | 2.40 Å |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
. | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | Q | A | F | N | M | G | A | V | A | V | G | A | T | I | Y | F | G | . |
. |
. |
. |
. |
. |
. |
. |
S | E | E | S | R | R | Q | I | E | E | I | S | A | A | F | E | R | A | H | E | L | G | M | V | T | V | . |
L | W | A | Y | L | R | N | S | A | F | K | K | D | G | V | D | Y | H | V | S | A | D | L | T | G | Q |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
| . | . | . | . | . | . | . | . |
|
|   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|
| . |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | E | A | A | L | E | S | G | V | K | E | V | A | V | F | A | A | A | S | E | A | F | S | Q | R | N | I | N | C | S | I | K | D | S | L | E | R | F | V | P | V | L | E | A | A | R | Q | H | Q | V | R | V | R | G | Y | I | S | C | V | L | G | C | P | Y | D | G | . |
. |
. |
. |
. |
D | V | D | P | R | Q | V | A | W |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| T | T |
| B | T | T | T | B | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 160 | . |
  |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | N | H | L | A | A | T | I | G | A | D | I | V | K | Q | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
V | A | R | E | L | Q | Q | M | G | C | Y | E | V | S | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|