Job Description P0A991 Confidence 97.76% Date Thu Jan 5 11:09:38 GMT 2012 Rank 69 Aligned Residues 203 % Identity 13% Template c1znnF_ PDB info PDB header:biosynthetic protein Chain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase Resolution 2.20 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		F	D	P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	.	.	.	A	F	N	M	G	A	V	A	V	G	A	T	I
Query Conservation																																																																		.	.	.
Alig confidence																				.	.	.	.	.																											.	.	.													.	.	.
Template Conservation																				.	.	.	.	.																											.	.	.
Template Sequence		V	V	N	A	E	Q	A	K	I	A	E	A	A	G	A	V	A	V	.	.	.	.	.	M	A	L	E	G	G	V	A	R	M	A	D	P	T	V	I	E	E	V	M	N	A	V	S	I	P	.	.	.	V	M	A	K	V	R	I	G	H	Y	V	E	A	R	V	L	E	A	L	G	V	D	Y	I	D	E	S	E
Template Known Secondary structure			S	S										T	T		S			.	.	.	.	.										S														S	S		.	.	.							T	T											T	T		S						T
Template Predicted Secondary structure																				.	.	.	.	.																											.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180														.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	G	S	E	E	S	R	R	Q	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	T	P	A	D	E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	D	L	G	E	A	A	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	R	H	M	R	K	V	N	A	Q	I
Template Known Secondary structure		T	S			S		S	S					G	G	G		S	S							S	S										T	T		S								T	T	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.															160	.	.	.	.	.	.	.	.	.	170	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		V	K	Q	K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	.	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G
Query Conservation																																																					.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																			.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence		R	K	V	V	N	M	S	E	D	E	L	V	A	E	A	K	Q	L	G	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	L	R	E	I	K	R	L	G	R	L	P	V	V	N	F	A	A	G	G	V	T	T	P	A	D	A	A	L	M	M	H	.	.	.	.	.	.	.	L	G	A
Template Known Secondary structure							S		G	G	G									T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	S		S	S						S	S			S										.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.								.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	L	I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q	D
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		D	G	V	F	V	G	S	G	I	F	K	S	E	N	P	.	.	E	K	Y	A	R	A	I	V	E
Template Known Secondary structure		S						T					S	S	S		.	.
Template Predicted Secondary structure																	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions