Job Description P0A991 Confidence 98.59% Date Thu Jan 5 11:09:38 GMT 2012 Rank 23 Aligned Residues 160 % Identity 19% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		98	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		V	E	L	A	I	E	A	G	C	N	C	V	.	.	.	.	.	.	.	.	.	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E	Q	A	F	N	M	G	A	V	A	V	G	A	T	I
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	D	I	A	L	F	S	T	I	H	R	V	Q	L	.	.
Template Known Secondary structure							G	G	G		S							T	T	S															T	T			G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T	T							.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		Y	F	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T	I	G	A	D	I	V	K	Q	K	M	A	E	N	N	.	G	G	Y
Query Conservation																																																																														.
Alig confidence		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	P	S	G	S	F	S	P	K	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	S	L	E	E	A	V	Q	.	.	.	.	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	R	G	V	S	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T	S											T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S							.	.	.	.				T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
											79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K	R	A	G	G	M	G	L	I	L	G	R	K	A	F	K	K	S
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.												.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.												.	.	.	.	.	.	.
Template Sequence		S	D	I	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	S	I	P	V	I	A	I	G	G	.	.	M	T	P	D	R	L	R	D	V	K	Q	.	.	.	.	.	.	.	A	G	A	D	G	I	A	V	M	S	G	I	F	S	S	A
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S						S	S	.	.			G	G	G							.	.	.	.	.	.	.	T	T		S					S					T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.												.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.																													.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	G	V	K	L	I	N	A	V	Q	D	V	Y	L	D
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		E	P	L	.	.	E	A	A	R	R	Y	S	R	K	L	K	E
Template Known Secondary structure		S			.	.
Template Predicted Secondary structure					.	.
Template SS confidence
		184	.	.			.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions