 |
Job Description | P0A991 | Confidence | 27.05% | Date | Thu Jan 5 11:09:38 GMT 2012 |
Rank | 466 | Aligned Residues | 78 |
% Identity | 18% | Template | c1vl2C_ |
PDB info |
PDB header:ligase | Chain: C: PDB Molecule:argininosuccinate synthase; |
PDBTitle: crystal structure of argininosuccinate synthase (tm1780) from2 thermotoga maritima at 1.65 a resolution
|
Resolution | 1.65 Å |
|
 |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | D | D | R | V | Y | S | K | L | T | S | E | N | P | I | D | L | V | R | Y | Q | L | A | N | C | Y | M | G | R | A | G | L | I | N | S | . |
. |
. |
. |
G | G | A | A | G | G | E | T | D | L | S | D | A | V | R | T | A | V | I | N | K | R | A | G | G | M | G | L | I | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|
|
|
| . | . | . | . |
|
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
| . | . |
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
| . | . | . | . | . |   |
|   |   |
| . | . |
|
|
|   |
|   |
|
|   |
|   |
|
Template Sequence |   |
P | D | E | D | V | F | T | W | T | V | S | P | K | D | A | P | D | E | E | T | L | L | E | I | H | F | E | N | G | I | P | V | K | V | V | N | L | K | D | G | T | E | K | T | D | P | L | E | L | F | E | Y | L | N | E | V | . |
. |
. |
. |
. |
G | A | K | N | G | . |
. |
V | G | R | L | D | M | V | E | N | R | F | I |
Template Known Secondary structure |   |
|
| G | G | G |
|
| S | S |
|
| T | T | T | S |
| S | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | T |
|
|  |  |
| S |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  | T | T | . | . |
|
|  |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
| . | . |
|
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 260 | |
|
. | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
|
|
|
|
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
R | K | A | F | K | K | S | M | A | D | G | V | K | L | I | N | A | V | Q | D | V |
Query Conservation |   |
. | . | . | . |
|
|
|
|
|   |   |   |
|
|   |
|   |
|   |   |
|
|   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|
|
|
| . | . |   |   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
G | I | K | S | R | G | V | Y | E | T | P | . |
. |
G | A | T | I | L | W | I | A | H | R | D | L |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | |
|
. | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|