Job Description P27375 Confidence 2.60% Date Thu Jan 5 11:43:57 GMT 2012 Rank 57 Aligned Residues 67 % Identity 16% Template c1v06A_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: axh domain of the transcription factor hbp1 from m.musculus Resolution UNK

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	C	F	T	K	D	Y	E	H	Q	T	N	E	E	K	Q	S	L	M	Y	H	A	P	K	E	S	R	P	F	C	Q	H	R	Y	N	L	A	R	T	H	L	K	R	T	I	L	A	L	P	E	S	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	A	G	Y	G	S	Y	A	V	I	E
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		H	C	F	L	K	G	.	.	.	.	.	.	.	.	.	T	R	L	C	F	H	K	E	S	N	K	E	W	Q	D	V	E	D	F	A	R	A	A	.	.	S	C	D	N	E	E	E	I	Q	M	G	T	H	K	G	Y	G	S	D	G	L	K	L	L	S	H	E	E	S	V	S	F	G	E	S	V	L	K	L	T
Template Known Secondary structure		T	T	B		T	T	.	.	.	.	.	.	.	.	.						T	T	S	S			S											T	.	.	T	S	S			T	T	T		T	T		S	T	T	T	T	S	S													T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		213	.	.	.	.	.										.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		117	.	.	120	.											.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	L	D	G	.	.	.	.	.	.	.	.	.	.	G	D	K	A	F	Y	F	V
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	P	G	T	V	E	D	G	L	L	T	V	E	C	K	L	D	H	P	F	Y	V
Template Known Secondary structure					S	S	G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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