Job Description P0AFP2 Confidence 13.43% Date Thu Jan 5 11:26:53 GMT 2012 Rank 37 Aligned Residues 67 % Identity 13% Template c2xzm8_ PDB info PDB header:ribosome Chain: 8: PDB Molecule:rps25e,; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.					.																	.
Query SS confidence																										.					.																	.
Query Sequence		E	K	L	P	Q	E	E	K	M	E	K	E	D	S	F	P	Q	R	V	W	Q	I	V	A	.	A	I	P	E	.	G	Y	V	T	T	Y	G	D	V	A	K	L	A	G	S	P	.	R	A	A	R	Q	V	G	G	V	L	K	R	L	P	E	G	S	T	L	P	W	H	R
Query Conservation																										.					.																	.
Alig confidence																										.					.																	.
Template Conservation
Template Sequence		T	K	G	K	A	K	D	K	V	N	H	A	V	F	I	E	K	K	N	V	E	S	I	I	N	N	P	S	K	V	G	K	V	L	T	V	S	T	V	V	E	K	L	K	V	N	G	S	L	A	R	Q	L	M	R	T	M	A	D	R	K	L	V	E	K	V	A	K	N	G
Template Known Secondary structure			S	S									B	S												T			T	T	S		S													B															T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions