Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFP2
Confidence99.97%DateThu Jan 5 11:26:53 GMT 2012
Rank9Aligned Residues114
% Identity25%Templatec2g7hA_
PDB info PDB header:transferaseChain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: structure of an o6-methylguanine dna methyltransferase from2 methanococcus jannaschii (mj1529)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  LVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTL
Query Conservation      
     
         
          
   
   
  

 
 
 


 

   
 
  

 

 

  

    
Alig confidence 







..

















































..

















Template Conservation         
..  
  
       

   

 

  
   
  

 
   


 

   
 ..  



 
   

    
Template Sequence  AEIILKLY. . FAEIDDKKVRELISYKLEVPEFTKKVLDIVKDIEFGKTLTYGDIAKKLNT. . SPRAVGMALKRNPLPLII
Template Known Secondary structure  ..TT


S

TTTT

B
S

SS

TT

TT

TS..
T
S
TTTS
Template Predicted Secondary structure  ..
























..







Template SS confidence 















































































   51....... .60.........70.........80.........90.........100........ .110.........120......
 
   82.......90.........100.........110.........120........
Predicted Secondary structure 






















Query SS confidence 














































Query Sequence  PWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
Query Conservation 





 
 
 
         

 

  


     




    
 
Alig confidence 









.

















........









Template Conservation 





   
.
 

  
   
  

  
........         
Template Sequence  PCHRVVAKNS. LGGYSYGLDKKKFILERE. . . . . . . . RLNMVSFKFN
Template Known Secondary structure  GGGG
SSS.


SSS
S........SS






Template Predicted Secondary structure 





.






........





Template SS confidence 














































   127..130...... ...140.........150.... .....160....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions