Job Description P0AFP2 Confidence 13.01% Date Thu Jan 5 11:26:53 GMT 2012 Rank 38 Aligned Residues 61 % Identity 11% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	F	P	Q	R	V	W	Q	I	V	A	A	I	P	E	G	Y	V	T	T	Y	G	D	V	A	K	L	A	G	S	P	R	A	A	R	Q	V	G	G	V	L	K	R	L	P	E	G	S	T	L	P	W	H	R	V	V	N	R	H	G	T	I	S	L	T
Query Conservation
Alig confidence																		.	.	.													.	.
Template Conservation																		.	.	.													.	.
Template Sequence		D	E	I	D	K	K	I	I	K	I	L	Q	N	D	G	K	.	.	.	A	P	L	R	E	I	S	K	I	T	G	L	.	.	A	E	S	T	I	H	E	R	I	R	K	L	R	E	S	G	V	I	K	K	F	T	A	I	I	D	P	E	A	L	G	Y	S
Template Known Secondary structure																T	T	.	.	.											T	S	.	.															T	T	S	S									G	G	G	G	T
Template Predicted Secondary structure																		.	.	.													.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions