Job Description P37689 Confidence 79.63% Date Thu Jan 5 11:57:01 GMT 2012 Rank 38 Aligned Residues 162 % Identity 18% Template c3m6yA_ PDB info PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase; PDBTitle: structure of 4-hydroxy-2-oxoglutarate aldolase from bacillus cereus at2 1.45 a resolution. Resolution 1.45 Å

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		54	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	G	L	P	D	R	Q	M	G	N	S	E	.	V	G	H	V	N	L	G	A	G	R	I	V	Y	Q	D	L	T	R	L	D	V	E	I	K	D	R	A	F	F	A	N	P	V	L	T	G	A	V	D	K	A	K	N	A	G	K	A	V	H	I	M	G	L	L	S	A	G	G	V	H	S	H	E	D	H	I	M
Query Conservation														.
Alig confidence														.						.	.	.	.	.	.												.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.												.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		I	G	L	G	A	G	D	N	R	Q	A	A	V	V	A	E	I	A	.	.	.	.	.	.	K	H	Y	P	G	S	H	I	N	Q	V	.	.	.	.	.	.	F	P	S	V	G	A	T	R	A	N	L	.	.	.	.	G	E	K	D	S	W	I	N	S	L	V	S	P	T	G	K	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		G	G	G								T	.	.	.	.	.	.	T	T				S					B	.	.	.	.	.	.	G	G	G									.	.	.	.	T	T										B			S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.												.	.	.	.	.	.												.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.
Predicted Secondary structure																																.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Query Sequence		A	M	V	E	L	A	A	E	R	G	A	E	K	I	Y	L	H	A	F	L	D	G	R	D	T	P	P	R	S	A	.	.	.	.	.	.	E	S	S	L	K	K	F	E	E	K	F	A	A	L	G	K	G	R	V	A	S	I	I	G	R	Y	Y	A	M	D	R	D	N	R	W	.	.	.	.	.	.	.	.	D
Query Conservation																																.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.								.	.	.	.	.	.																				.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.																																	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	G	Y	V	N	I	.	.	.	.	.	.	.	S	T	G	P	I	S	A	A	G	E	E	K	A	I	V	P	I	K	T	A	I	A	L	V	R	D	X	G	G	N	S	L	.	.	.	.	.	K	Y	F	P	X	K	G	L	A	H	E	E	E	Y	R	A	V	A	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T					.	.	.	.	.	.	.			S	T	T	G	G	G	S	S	S																	T					.	.	.	.	.						T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
												124	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		R	V	E	K	A	Y	D	L	L	T	L	A	Q	G	E	F	Q	A	D	T	A	V	A	G	L	Q	A	A	Y	A	R	D	E	N	D	E	F	V	K	A	T	V	I	R	A	E	.	G	Q	P	D	A	A	M	E	D	G	D	A	L	I	F	M	N	F	R	A	D	R	A	R	E	I	T	R	A	F	V	N
Query Conservation																																																.
Alig confidence									.	.																									.	.												.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	A	E	E	G	F	A	.	.	L	E	P	T	G	G	I	D	K	E	N	F	E	T	I	V	R	I	A	L	E	A	N	V	.	.	E	Q	V	I	P	H	V	Y	S	S	I	I	D	K	E	T	G	N	T	.	.	.	.	.	.	.	.	.	.	.	K	V	E	A	V	R	E	L	L	A	V	V	K	K
Template Known Secondary structure						T			.	.				B	S	S			T	T	T											T	T		.	.	S		B						G	G	G	B		T	T	T			B	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.												.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions