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Job DescriptionP37689
Confidence100.00%DateThu Jan 5 11:57:01 GMT 2012
Rank2Aligned Residues512
% Identity34%Templatec3igzB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.... .....50....... ..60.........70........
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Query Sequence  MLVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH. TLIDASGLEVGLP. DRQMGNSEVGHVNLGAGRIVY
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Template Sequence  KDLPRRTVLIVVMDGLGIGPEDDYDAVHMASTPFMDAHRRDNRHFRCVRAHGTAVGLPTDADMGNSEVGHNALGAGRVAL
Template Known Secondary structure  SS




TT





STT
S

TT
TTTB
SGGGGT
SSTTS


SS


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  QDLTRLDVEIKDRAFFANPVLTGAVDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTP
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Template Sequence  QGASLVDDAIKSGEIYTGEGYRYLHGAFSKEGSTLHLIGLLSDGGVHSRDNQIYSIIEHAVKDGAKRIRVHALYDGRDVP
Template Known Secondary structure 
SGGGTSTSTT


SS

SS

TT


SSSS
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   159160.........170...... ...180......... 190... ......200.........210.........220........ .230
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Query Sequence  PRSAESSLKKFEEKFAAL. . . . GKGRVASIIGRYY. AMDR. DNRWDRVEKAYDLLTLAQGEFQADTAVAGLQAAYA. . RD
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Template Sequence  DGSSFRFTDELEAVLAKVRQNGCDAAIASGGGRMFVTMDRYDADWSIVERGWRAQVLGDA. RHFHSAKEAITTFREEDPK
Template Known Secondary structure  TTTTTT
TTTSS


TTS
TT

S.S

TT
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   170.........180.........190.........200.........210.........220......... 230.........240........
 
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Query Sequence  ENDEFVKATVIRAE. GQPDAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNVDFVMLTEYAADIKTA. . VA
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Template Sequence  VTDQYYPPFIVVDEQDKPLGTIEDGDAVLCVNFRGDRVIEMTRAFEDEDFNKFDRVRVPKVRYAGMMRYDGDLGIPNNFL
Template Known Secondary structure 

TTT


B
TTS
BS



TT





TTT
SS

SS

S





SBTTTTBSSS
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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   308.310.........320.........330.........340.........350.........360.... .....370.........380......
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Query Sequence  YPPASLVNTFGEWMAKNDKTQLRISETEKYAHVTFFFNGGVEESFKGEDRILINSPK. VATYDLQPEMSSAELTEKLVAA
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Template Sequence  VPPPKLTRVSEEYLCGSGLNIFACSETQKFGHVTYFWNGNRSGKIDEKHETFKEVPSDRVQFNEKPRMQSAAITEAAIEA
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S
TT

T




TTTS

S
S
TTT


SS
GGGSTTTT
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   329330.........340.........350.........360.........370.........380.........390.........400........
 
   387..390.........400.........410.........420.........430.........440.........450........
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Query Sequence  IKSGKYDTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQMRDPATGQ. . . . . . . .
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Template Sequence  LKSGMYNVVRINFPNGDMVGHTGDLKATITGVEAVDESLAKLKDAVDSVNGVYIVTADHGNSDDMAQRDKKGKPMKDGNG
Template Known Secondary structure  S

S
TTT
TT

SSBSTT

B
B
TT

B
B
TTS
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   459460.........470........ .480.........490.........500.........510....
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Query Sequence  . . . AHTAHTNLPVPLIYVGDKNV. . . . . . KAVEGGKLSDIAPTMLSLMGMEIPQEMTGKPLFIVE
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Template Sequence  NVLPLTSHTLSPVPVFIGGAGLDPRVAMRTDLPAAGLANVTATFINLLGFEAPEDYEP. SLIYVE
Template Known Secondary structure 
B
B

S
B



TTS
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TT
BTTB


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   489490.........500.........510.........520.........530.........540...... ...550..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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