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Job DescriptionP37689
Confidence99.30%DateThu Jan 5 11:57:01 GMT 2012
Rank30Aligned Residues133
% Identity25%Templatec2gsoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:phosphodiesterase-nucleotide pyrophosphatase; PDBTitle: structure of xac nucleotide2 pyrophosphatase/phosphodiesterase in complex with vanadate
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   378.380.........390.........400........ .410.........420.........430...... ...440.........450.
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Query Sequence  ELTEKLVAAIKSGKYDTIICNYPNGDMVGHT. . GVMEAAVKAVEALDHCVEEVAKAVESVG. . . . GQLLITADHGNAEQM
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Template Sequence  DAVRGWLATDGAQRNRLVTLYFEHVDEAGHDHGPESRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVA
Template Known Secondary structure 

GGG


TTST
GGG
S



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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   452..
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Query Sequence  RDP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PGHAISVEDIAPPQIATAITDGQVIGFEPLPGQQAAAEASVLGAHDHYDCWRKAELPARWQYGSHPRIPSLVCQMHEGWD
Template Known Secondary structure  TT
S
TTT


BS
TT
STTGGGS
GGG

S
STTS
S
TT
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   265....270.........280.........290.........300.........310.........320.........330.........340....
 
   455....460.........470..... ....480.........490.........500........ .510.
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Query Sequence  . . . . . . . . . . . . . . . . ATGQAHTAHTNLPVPLIYVGD. . KNVKAVEGGKLSDIAPTMLSLMGMEIPQEMTGK. . PLF
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Template Sequence  ALFPDKLAKRAQRGTRGSHGYDPALPSMRAVFLAQGPDLAQGKTLPGFDNVDVYALMSRLLGIPAAP. NDGNPATLL
Template Known Secondary structure 
S


S


S
TTSGGG
B
STTB
SS

GGGTT



S.
SS
TTTTG
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   345....350.........360.........370.........380.........390.........400.........410. ........420
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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