Job Description P77228 Confidence 99.94% Date Thu Jan 5 12:26:35 GMT 2012 Rank 3 Aligned Residues 396 % Identity 11% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		M	D	F	Q	L	Y	S	L	G	A	A	L	V	F	H	.	.	E	I	F	F	P	E	S	S	T	A	M	A	L	I	L	A	M	G	T	Y	G	A	G	Y	V	A	R	I	V	G	A	F	I	F	G	K	M	G	D	R	I	G	R	K	K	V	L	F	I	T	I	T	M	M	G	I	C	T	T	L	I	G	V
Query Conservation																	.	.
Alig confidence																	.	.																	.	.	.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	.	.	.	.	.	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I	I	T	G	M	L	V	M	F	A	P	F	F	I
Template Known Secondary structure																																			.	.	.	.	.									T												T	T		T												T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	T	Y	A	Q	I	G	V	F	A	P	I	L	L	V	T	L	R	I	I	Q	G	L	G	A	G	A	E	I	S	G	A	G	T	M	L	A	E	Y	A	P	K	G	K	R	G	I	I	S	S	F	V	A	M	G	T	N	C	G	T	L	S	A	T	A	I	W	A	F	M	F	F	I	L	S	K	E	E	L
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	.	.	.	.	.	.	.	A	L	G	A	S	I	V	G	I	M	F	T	I	N
Template Known Secondary structure			T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S															.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	G	W	R	I	P	F	L	A	S	V	V	V	M	V	F	A	I	W	L	R	M	N	L	K	E	S	P	V	F	E	K	V	N	D	S	N	Q	P	T	A	K	P	A	P	A	G	S	M	F	Q	S	K	S	F	W	L	A	T	G	L	R	F	G	Q	A	G	N	S	G	L	I	Q	T	F	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F	D	Q	Q	F	A	N
Template Known Secondary structure																						S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	V	Q	T	L	L	F	N	K	A	I	P	T	D	A	L	M	I	S	S	I	L	G	F	M	T	I	P	F	L	G	W	L	S	D	K	I	G	R	R	I	P	Y	I	I	M	N	T	S	A	I	V	L	A	W	P	M	L	S	I	I	V	D	K	S	Y	A	P	S	T	I	M	V	A	L	I	V	I	H
Query Conservation
Alig confidence																																																											.	.	.
Template Conservation																																																											.	.	.
Template Sequence		F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	.	.	.	I	I	G	S	S	F	A	T	S	A	L	E	V	V	I	L	K	T	L	H
Template Known Secondary structure				T	T	S	S	S																									T	T																									.	.	.						T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	A	V	L	G	L	F	A	L	E	N	I	T	M	A	E	M	F	G	C	K	N	R	F	T	R	M	A	I	S	K	E	I	G	G	L	I	A	S	G	F	G	P	I	L	A	G	I	F	C	T	M	T	E	S	W	Y	P	I	A	I	M	I	M	A	Y	S	V	I	G	L	I	S	A	L	K	M	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L	I	S	V	F	T	L	S	G
Template Known Secondary structure																				S		G	G	G										T	T	T																																											S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	R	D	L	S	A	L	E	D	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	P	L	S	L	L	R	R	Q	V	N	E
Template Known Secondary structure		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions