Job Description P46142 Confidence 46.21% Date Thu Jan 5 12:04:10 GMT 2012 Rank 2 Aligned Residues 42 % Identity 21% Template c3t97B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup62/nup54 Resolution 2.80 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290								.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		Q	S	Q	K	L	S	R	K	L	Q	D	D	W	V	T	L	E	K	G	Q	.	.	.	.	.	.	.	Y	P	L	T	M	K	V	S	E	I	N	S	K	K	V	A	I	L	M	K	I	D
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	H	Q	T	R	L	D	I	I	S	E	D	I	S	E	L	Q	K	N	Q	T	T	T	M	A	K	I	A	Q	Y	K	R	K	L	M	D	L	S	H	R	T	L	Q	V	L	I	K	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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