 |
Job Description | P46142 | Confidence | 6.57% | Date | Thu Jan 5 12:04:10 GMT 2012 |
Rank | 66 | Aligned Residues | 30 |
% Identity | 33% | Template | c3f3hA_ |
PDB info |
PDB header:antitumor protein | Chain: A: PDB Molecule:immunomodulatory protein ling zhi-8; |
PDBTitle: crystal structure and anti-tumor activity of lz-8 from the fungus2 ganoderma lucidium
|
Resolution | 2.10 Å |
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | A | S | G | W | S | V | N | F | Y | S | F | Q | A | A | A | S | D | R | G | R | V | V | D | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | K | T | N | N | K | Y | L | I |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|
|
|
|   |
| . | . | . | . | . |
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|   |   |
|
|
Template Sequence |   |
E | S | D | G | S | Q | K | V | N | F | L | E | Y | . |
. |
. |
. |
. |
N | S | G | Y | G | I | A | D | T | N | T | I | Q | V | F | V | V | D | P | D | T | N | N | D | F | I | I |
Template Known Secondary structure |   |
| T | T | S |
|  |  |  |  |  |  |  |  | . | . | . | . | . | T | T | T |
|
|  |  | T | T | S |
|  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|