 |
Job Description | P0ABB0 | Confidence | 96.46% | Date | Thu Jan 5 11:15:04 GMT 2012 |
Rank | 72 | Aligned Residues | 67 |
% Identity | 25% | Template | d1skye2 |
SCOP info | Domain of alpha and beta subunits of F1 ATP synthase-like
| N-terminal domain of alpha and beta subunits of F1 ATP synthase
| N-terminal domain of alpha and beta subunits of F1 ATP synthase
|
Resolution | 3.20 |
|
 |
  |   |
28 | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  | . |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | G | T | I | V | S | V | S | D | G | V | I | R | I | H | G | L | A | D | C | M | . |
. |
Q | G | E | M | I | S | L | P | G | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | Y | A | I | A | . |
L | N | L | E | R | D | S | V | G | A | V | V | M | G | P | Y | A | D | L | A | E | G | M | K | V | K | C | T | G | R | I |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |
|   | . | . |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
| . |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|   |   |
|   |
|
|
|   |
|
Template Sequence |   |
R | G | R | V | I | Q | V | M | G | P | V | V | D | V | K | F | E | N | G | H | L | P | A | I | Y | N | A | L | K | I | Q | H | K | A | R | N | E | N | E | V | D | I | D | L | T | L | E | V | A | L | H | L | G | D | D | T | V | R | T | I | A | M | A | S | T | D | G | L | I | R | G | M | E | V | I | D | T | G | A | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | T | T |
|
|
|
| T | T |
|  |  |  |  |  |  |
|
| S | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |
|
| T | T |
|
| T | T |
|  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|