Job Description P0ABB0 Confidence 100.00% Date Thu Jan 5 11:15:04 GMT 2012 Rank 1 Aligned Residues 487 % Identity 100% Template c3oaaC_ PDB info PDB header:hydrolase/transport protein Chain: C: PDB Molecule:atp synthase subunit alpha; PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon Resolution 3.26 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	N	E	G	T	I	V	S	V	S	D	G	V	I	R	I	H	G	L	A	D	C	M	Q	G	E	M	I	S	L	P	G	N	R	Y	A	I	A	L	N	L	E	R	D	S	V	G	A	V	V	M	G	P	Y	A	D	L	A	E	G	M	K	V	K	C	T	G	R	I	L	E	V	P	V	G	R	G	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	N	E	G	T	I	V	S	V	S	D	G	V	I	R	I	H	G	L	A	D	C	M	Q	G	E	M	I	S	L	P	G	N	R	Y	A	I	A	L	N	L	E	R	D	S	V	G	A	V	V	M	G	P	Y	A	D	L	A	E	G	M	K	V	K	C	T	G	R	I	L	E	V	P	V	G	R	G	L	L
Template Known Secondary structure				S									T	T									S			T	T						S	S	S										T	T							S	S			S	S			T	T							S	S							S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	V	N	T	L	G	A	P	I	D	G	K	G	P	L	D	H	D	G	F	S	A	V	E	A	I	A	P	G	V	I	E	R	Q	S	V	D	Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	V	V	N	T	L	G	A	P	I	D	G	K	G	P	L	D	H	D	G	F	S	A	V	E	A	I	A	P	G	V	I	E	R	Q	S	V	D	Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I
Template Known Secondary structure		T					S	S	S				S	S	S		S									S	S						T	T	S	B					S	B				S								S			B	T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	R	D	S	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P	Y	A	G	C	A	M	G	E	Y	F	R	D	R	G	E	D	A	L	I	I	Y	D	D	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	R	D	S	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P	Y	A	G	C	A	M	G	E	Y	F	R	D	R	G	E	D	A	L	I	I	Y	D	D	L	S
Template Known Secondary structure		T	T	T	T	T	S									S																S	T	T	G	G	G								T	T	S																						T	T									T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	A	V	A	Y	R	Q	I	S	L	L	L	R	R	P	P	G	R	E	A	F	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	R	V	N	A	E	Y	V	E	A	F	T	K	G	E	V	K	G	K	T	G	S	L	T	A	L	P	I	I	E	T	Q	A	G	D	V	S	A	F	V	P	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	A	V	A	Y	R	Q	I	S	L	L	L	R	R	P	P	G	R	E	A	F	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	R	V	N	A	E	Y	V	E	A	F	T	K	G	E	V	K	G	K	T	G	S	L	T	A	L	P	I	I	E	T	Q	A	G	D	V	S	A	F	V	P	T	N
Template Known Secondary structure														T	T			B		G	G	G		B	T	T											T						G	G	G	G		S	T	T	S		S				S													S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	I	T	D	G	Q	I	F	L	E	T	N	L	F	N	A	G	I	R	P	A	V	N	P	G	I	S	V	S	R	V	G	G	A	A	Q	T	K	I	M	K	K	L	S	G	G	I	R	T	A	L	A	Q	Y	R	E	L	A	A	F	S	Q	F	A	S	D	L	D	D	A	T	R	K	Q	L	D	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	S	I	T	D	G	Q	I	F	L	E	T	N	L	F	N	A	G	I	R	P	A	V	N	P	G	I	S	V	S	R	V	G	G	A	A	Q	T	K	I	M	K	K	L	S	G	G	I	R	T	A	L	A	Q	Y	R	E	L	A	A	F	S	Q	F	A	S	D	L	D	D	A	T	R	K	Q	L	D	H	G
Template Known Secondary structure						S	S													T		S	S		B		T	T	T				S	S	G	G	G	G	S																						G	G	G	G	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	T	E	L	L	K	Q	K	Q	Y	A	P	M	S	V	A	Q	Q	S	L	V	L	F	A	A	E	R	G	Y	L	A	D	V	E	L	S	K	I	G	S	F	E	A	A	L	L	A	Y	V	D	R	D	H	A	P	L	M	Q	E	I	N	Q	T	G	G	Y	N	D	E	I	E	G	K	L	K	G	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	V	T	E	L	L	K	Q	K	Q	Y	A	P	M	S	V	A	Q	Q	S	L	V	L	F	A	A	E	R	G	Y	L	A	D	V	E	L	S	K	I	G	S	F	E	A	A	L	L	A	Y	V	D	R	D	H	A	P	L	M	Q	E	I	N	Q	T	G	G	Y	N	D	E	I	E	G	K	L	K	G	I	L
Template Known Secondary structure								S				T	T					S											S	S		T	T	T	T	T			T	T					T								T	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		505	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	F	K	A	T	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	F	K	A	T	Q
Template Known Secondary structure			T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		505	.	.	.	.	510	.