Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABB0
Confidence87.98%DateThu Jan 5 11:15:04 GMT 2012
Rank302Aligned Residues55
% Identity16%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200.........210.........
Predicted Secondary structure 





















Query SS confidence 






















































Query Sequence  ELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALA
Query Conservation    
 
  
 


 
    
  
       


 



  

 
    
       
Alig confidence 






















































Template Conservation 
 
 
  





 
  

  
                                 
Template Sequence  IVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPG
Template Known Secondary structure  STTS
TT


SS
SSS

TT
Template Predicted Secondary structure 























Template SS confidence 






















































   6...10.........20.........30.........40.........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions