Job Description P0ABB0 Confidence 90.60% Date Thu Jan 5 11:15:04 GMT 2012 Rank 186 Aligned Residues 51 % Identity 22% Template c3eihB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas Resolution 3.25 Å

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I	N	Q	R	D	S	G	I	K	C	I	Y	V	A	.	.	.	.	.	.	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	H	G
Query Conservation																																			.	.	.	.	.	.
Alig confidence																			.																.	.	.	.	.	.
Template Conservation																			.
Template Sequence		I	L	L	Y	G	P	P	G	T	G	K	S	Y	L	A	K	A	.	V	A	T	E	A	N	S	T	F	F	S	V	S	S	S	D	L	V	S	K	W	M	G	E	S	E	K	L	V	K	Q	L	F	A	M	A	R	E	N	K
Template Known Secondary structure							S	T	T	S									.				T	T	T												T	T	T	S	S	S	S		T	T	T										T	T	S
Template Predicted Secondary structure																			.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions