Job Description P0ABB0 Confidence 87.59% Date Thu Jan 5 11:15:04 GMT 2012 Rank 313 Aligned Residues 67 % Identity 24% Template c3cf1C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx Resolution 4.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I	N	Q	R	D	S	G	I	K	C	I	Y	V	A	.	.	.	.	.	.	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q
Query Conservation																																			.	.	.	.	.	.
Alig confidence																			.																.	.	.	.	.	.																			.	.	.
Template Conservation																			.																																								.	.	.
Template Sequence		V	L	F	Y	G	P	P	G	C	G	K	T	L	L	A	K	A	.	I	A	N	E	C	Q	A	N	F	I	S	I	K	G	P	E	L	L	T	M	W	F	G	E	S	E	A	N	V	R	E	I	F	D	K	A	R	Q	A	.	.	.	A	P	C	V	L	F	F	D	E	L	D	S	I	A	K	A	R
Template Known Secondary structure								T	T	S									.					T	T																T	T	T		T							T	T	T	T	T	T	T	.	.	.		S						S	S	G	G	G	G
Template Predicted Secondary structure																			.																																								.	.	.
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530		.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.				570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions