Job Description P0ABB0 Confidence 92.69% Date Thu Jan 5 11:15:04 GMT 2012 Rank 144 Aligned Residues 103 % Identity 15% Template c2w0sB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate Resolution 2.92 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I	N	Q	R	D	S	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P
Query Conservation
Alig confidence																								.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		S	R	G	A	L	I	V	F	E	G	L	D	K	S	G	K	T	T	Q	C	M	N	.	.	I	M	E	S	I	P	A	N	T	I	K	Y	L	N	F	P	Q	R	S	T	V	T	G	K	M	I	D	D	Y	L	T	R	K	.	.	.	.	.	.	.	.	.	K	T	Y	N	D	H	I	V	N	L	L	F	C	A
Template Known Secondary structure												S	T	T	S									.	.					S		T	T	S						S	S		T	T	S											T	T	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	G	C	A	M	G	E	Y	F	R	D	R	G	E	D	A	L	I	I	Y	D	D	L	S	K	Q	A	V	A	Y	R	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	W	E	F	A	S	F	I	Q	E	Q	L	E	Q	G	I	T	L	I	V	D	R	Y	A	F	S	G	V	A	Y	A	A	A
Template Known Secondary structure					T	T										T	T							S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions