Job Description P0ABB0 Confidence 89.95% Date Thu Jan 5 11:15:04 GMT 2012 Rank 216 Aligned Residues 112 % Identity 21% Template c2vb6A_ PDB info PDB header:motor protein Chain: A: PDB Molecule:myosin vi; PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2) Resolution 2.30 Å

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		50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		G	E	M	I	S	L	P	G	N	.	.	.	.	R	Y	A	I	A	L	N	L	E	R	D	S	V	G	A	V	V	M	G	P	Y	A	D	L	A	E	G	M	K	V	K	C	T	G	R	I	L	E	V	P	V	G	R	G	L	L	G	R	V	V	N	T	L	G	A	P	I	D	G	K	G	P	L	D	H	D	G
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	P	V	W	A	P	H	P	T	D	G	F	Q	V	G	N	I	V	D	I	G	P	D	S	L	T	I	E	P	L	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	T	F	L	A	L	I	N	Q	V	F	.	.	.	.	.	.	.	.	.	.	P	A	E	E	D	S	K	K	D	V	E	D
Template Known Secondary structure										T	T	T												S	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	T	T							G	G	G			.	.	.	.	.	.	.	.	.	.				S		S	S				S	B
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.
		126	.	.	.	130	.																												.	.	.	.	.	.	.	.	140	.																				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	A	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	G	V	I	E	R	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	C	S	L	M	Y	L	N	E	A	T	L	L	H	N	I	K	V	R	Y	S	K	D	R	I	Y	T	Y	V	A	N	I	L	I	A	V	N	P	Y	F	D	I	P	K	I	Y	S	S	E	T	I	K	S	Y	Q	G	K	S	L	G	T	M	P	P	H	V	F	A	I	A	D	K	A	F	R	D	M	K	V	L
Template Known Secondary structure		G	G	G	S	S	S		S														T	T							T	T								S	S			S	S	T	T	S								T	T			B	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	S	Q	S	I	I	V	S	G	E	S	G	A	G	K	T	E	N	T	K	F	V	L
Template Known Secondary structure		T										S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions