Job Description P0ABB0 Confidence 100.00% Date Thu Jan 5 11:15:04 GMT 2012 Rank 12 Aligned Residues 421 % Identity 24% Template c2jizD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp synthase subunit beta; PDBTitle: the structure of f1-atpase inhibited by resveratrol. Resolution 2.3 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																							.								.	.	.												.
Query SS confidence																							.								.	.	.												.
Query Sequence		E	G	T	I	V	S	V	S	D	G	V	I	R	I	H	G	L	A	D	C	M	.	Q	G	E	M	I	S	L	.	.	.	P	G	N	R	Y	A	I	A	L	N	L	.	E	R	D	S	V	G	A	V	V	M	G	P	Y	A	D	L	A	E	G	M	K	V	K	C	T	G	R	I	L	E	V	P	V	G	R	G
Query Conservation																							.								.	.	.												.
Alig confidence																							.								.	.	.												.
Template Conservation
Template Sequence		T	G	R	I	V	A	V	I	G	A	V	V	D	V	Q	F	D	E	G	L	P	P	I	L	N	A	L	E	V	Q	G	R	E	T	R	L	V	L	E	V	A	Q	H	L	G	E	S	T	V	R	T	I	A	M	D	G	T	E	G	L	V	R	G	Q	K	V	L	D	S	G	A	P	I	R	I	P	V	G	P	E
Template Known Secondary structure										T	T							S	S					T	T						S	S		S	S												T	T							S	S			T	T			T	T							S	S	S						S	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	R	V	V	N	T	L	G	A	P	I	D	G	K	G	P	L	D	H	D	G	F	S	A	V	E	A	I	A	P	G	V	I	E	R	Q	S	V	D	Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	G	R	I	M	N	V	I	G	E	P	I	D	E	R	G	P	I	K	T	K	Q	F	A	A	I	H	A	E	A	P	E	F	V	E	M	S	V	E	Q	E	I	L	V	T	G	I	K	V	V	D	L	L	A	P	Y	A	K	G	G	K	I	G	L	F	G	G	A	G	V	G	K	T	V	L	I	M	E	L
Template Known Secondary structure		G	T	T					T	T	S		B		S	S	S						S					S							G	G	G											S								S				T	T								S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		183	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.
Predicted Secondary structure						.																													.	.	.	.	.	.																																							.
Query SS confidence						.																													.	.	.	.	.	.																																							.
Query Sequence		I	I	N	Q	.	R	D	S	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	.	.	.	.	.	.	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P	Y	A	G	C	A	M	G	E	Y	F	R	D	R	.	G	E
Query Conservation						.																													.	.	.	.	.	.																																							.
Alig confidence						.																													.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		I	N	N	V	A	K	A	H	G	G	Y	S	V	F	A	G	V	G	E	R	T	R	E	G	N	D	L	Y	H	E	M	I	E	S	G	V	I	N	L	K	D	A	T	S	K	V	A	L	V	Y	G	Q	M	N	E	P	P	G	A	R	A	R	V	A	L	T	G	L	T	V	A	E	Y	F	R	D	Q	E	G	Q
Template Known Secondary structure						T	T	T		S	S								S	S																T	S	S		S	S	S	S											T	T	S																						S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	I	I	Y	D	D	L	S	K	Q	A	V	A	Y	R	Q	I	S	L	L	L	R	R	P	P	G	R	E	A	F	P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	R	V	N	A	E	Y	V	E	A	F	T	K	G	E	V	K	G	K	T	G	S	L	T	A	L	P	I	I	E	T	Q	A
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	L	L	F	I	D	N	I	F	R	F	T	Q	A	G	S	E	V	S	A	L	L	G	R	I	P	S	A	V	G	Y	Q	P	T	L	A	T	D	M	G	T	M	Q	E	R	I	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	G	S	I	T	S	V	Q	A	I	Y	V	P	A
Template Known Secondary structure										T											T	T	T	T	T					G	G	G			T	T										T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S												G	G
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.																300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																															.																																	.	.
Query SS confidence																																															.																																	.	.
Query Sequence		G	D	V	S	A	F	V	P	T	N	V	I	S	I	T	D	G	Q	I	F	L	E	T	N	L	F	N	A	G	I	R	P	A	V	N	P	G	I	S	V	S	R	V	G	G	.	A	A	Q	T	K	I	M	K	K	L	S	G	G	I	R	T	A	L	A	Q	Y	R	E	L	A	A	F	S	Q	F	A	S	.	.
Query Conservation																																															.																																	.	.
Alig confidence																																															.																																	.	.
Template Conservation
Template Sequence		D	D	L	T	D	P	A	P	A	T	T	F	A	H	L	D	A	T	T	V	L	S	R	A	I	A	E	L	G	I	Y	P	A	V	D	P	L	D	S	T	S	R	I	M	D	P	N	I	V	G	S	E	H	Y	D	V	A	R	G	V	Q	K	I	L	Q	D	Y	K	S	L	Q	D	I	I	A	I	L	G	M	D
Template Known Secondary structure		G		T	T	S							G	G	G		S					B						T	T	T		S	S		B		T	T	S				T	T		S																																		S	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.											.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	D	D	A	T	R	K	Q	L	D	H	G	Q	K	V	T	E	L	L	K	Q	.	.	.	.	.	.	.	.	.	.	K	Q	Y	A	P	M	S	V	A	Q	Q	S	L	V	L	F	A	A	E	R	G	Y	L	A	D	V	E	L	S	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	S	E	E	D	K	L	T	V	S	R	A	R	K	I	Q	R	F	L	S	Q	P	F	Q	V	A	E	V	F	T	G	H	L	G	K	L	V	P	L	K	E	T	I	K	G	F	Q	Q	I	L	A	G	E	Y	D	H	L	P	E	Q	A
Template Known Secondary structure		T	S		T	T															T					S	T	T					S	S																				T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.