Job Description P0ABB0 Confidence 97.98% Date Thu Jan 5 11:15:04 GMT 2012 Rank 48 Aligned Residues 182 % Identity 19% Template c2dr3A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0273 protein ph0284; PDBTitle: crystal structure of reca superfamily atpase ph0284 from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure															.	.																																																									.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																																																									.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	T	G	Y	K	A	V	D	S	M	I	P	.	.	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I	N	Q	R	D	S	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	E	E	.	.	.	.	.	.	.	.	.
Query Conservation															.	.																																																									.	.	.	.	.	.	.	.	.
Alig confidence															.	.																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	T	G	I	P	G	V	D	E	I	L	H	G	G	I	P	E	R	N	V	V	L	L	S	G	G	P	G	T	G	K	T	I	F	S	Q	Q	F	L	W	N	G	L	K	M	G	E	P	G	I	Y	V	A	L	E	E	H	P	V	Q	V	R	Q	N	M	A	Q	F	G	W	D	V	K	P	Y	E	E	K	G
Template Known Secondary structure							T	T					T	T	T	S			T	T									T	T	S	S															T	T								S	S	S											T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
										215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P	Y	A	G	C	A	M	G	E	Y	F	R	D	R	G	E	D	A	L	I	I	Y	D	D	L	S	K	Q	A	V	A	Y	R	Q	I	S	L	L	L	R	R	P	P	G	R	E	A	F
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																							.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	A	M	V	D	A	F	T	A	G	I	G	K	E	Y	E	K	Y	I	V	H	D	L	T	D	I	R	E	F	.	.	.	.	.	.	I	E	V	L	R	Q	A	I	R	D	I	N	A	K	R	V	V	V	D	S	V	T	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	N	K
Template Known Secondary structure		S							S	T	T	T	T						S		B		S			S	S					.	.	.	.	.	.												T								T	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.							.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	V	F	Y	L	H	S	R	L	L	E	R	A	A	R	V	N	A	E	Y	V	E	A	F	T	K	G	E	V	K	G	K	T	G	S	L	T	A	L	P	I	I	E	T	Q	A	G	D	V	S	A	F	V	P	T	N	V	I	S	I	T	D	G	Q	I	F	L	E	T	N	L	F	N	A	G	I	R	P
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Sequence		P	A	M	A	R	S	I	I	L	Q	L	K	R	V	L	A	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	T	S	I	F	V	S	Q	V	S	G	F	G	.	.	.	.	.	.	P	G	V	E	H	G	V	D	G	I	I	R	L	D	L	D	E	I	D	G	E	L	K	R
Template Known Secondary structure		G	G	G															T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														.	.	.	.	.	.							S	S											T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																			.	.	.	.	.	.	.	170	.	.	.	.	.	.							.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		367	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	N	P	G	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	I	V	W	K	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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