Job Description P0ABB0 Confidence 93.34% Date Thu Jan 5 11:15:04 GMT 2012 Rank 125 Aligned Residues 125 % Identity 18% Template c2bkiA_ PDB info PDB header:motor protein/metal-binding protein Chain: A: PDB Molecule:unconventional myosin; PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure Resolution 2.9 Å

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		50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure											.	.	.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	M	I	S	L	P	G	N	.	.	.	.	R	Y	A	I	A	L	N	L	E	R	D	S	V	G	A	V	V	M	G	P	Y	A	D	L	.	.	A	E	G	M	K	V	K	C	T	G	R	I	L	E	V	P	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																									.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	W	A	P	H	P	T	D	G	F	Q	V	G	N	I	V	D	I	G	P	D	S	L	T	I	E	P	L	N	Q	K	G	K	T	F	L	A	L	I	N	Q	V	F	P	A	E	E	D	S	K	K	D	V	E	D	N	C	S	L	M	Y	L	N	E	A	T	L	L	H	N	I	K	V	R	Y	S	K
Template Known Secondary structure		S								T	T	T												S	S							S	S	S	S	S							G	G	G						S		T	T				S	B	G	G	G	S	S	S		S													T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
						102	.	.	.	.	.				.	.	110	.	.	.		.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.							.	.	.							.		.
Query SS confidence		.	.	.	.							.	.	.							.		.
Query Sequence		.	.	.	.	G	L	L	G	R	V	.	.	.	V	N	T	L	G	A	.	P	.	I	D	G	K	G	P	L	D	H	D	G	F	S	A	V	E	A	I	A	P	G	V	I	E	R	Q	S	V	D	Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q
Query Conservation		.	.	.	.							.	.	.							.		.
Alig confidence		.	.	.	.							.	.	.							.		.																					.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.
Template Sequence		D	R	I	Y	T	Y	V	A	N	I	L	I	A	V	N	P	Y	F	D	I	P	K	I	Y	S	S	E	T	I	K	S	Y	Q	G	K	S	L	G	T	M	P	P	.	.	.	.	.	.	.	.	.	H	V	F	A	I	A	D	K	A	F	R	D	M	K	V	L	K	L	S	Q	S	I	I	V	S	G	E	S	G
Template Known Secondary structure		T							T	T								S	S			T	T	S	S	S								S	S			T	T	T	S		S	.	.	.	.	.	.	.	.	.																T	T											T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	T	A	L	A	I	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	K	T	E	N	T	K	F	V	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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