Job Description P0ABB0 Confidence 98.69% Date Thu Jan 5 11:15:04 GMT 2012 Rank 35 Aligned Residues 181 % Identity 14% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.
Predicted Secondary structure																	.	.																																.																								.	.	.	.	.	.
Query SS confidence																	.	.																																.																								.	.	.	.	.	.
Query Sequence		Q	P	V	Q	T	G	Y	K	A	V	D	S	M	I	P	.	.	I	G	R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	L	A	I	D	A	I	I	N	Q	R	D	S	.	G	I	K	C	I	Y	V	A	I	G	Q	K	A	S	T	I	S	N	V	V	R	K	L	.	.	.	.	.	.	E	E
Query Conservation																	.	.																																.																								.	.	.	.	.	.
Alig confidence																	.	.																																.																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	M	R	T	M	I	E	G	F	D	D	I	S	H	G	G	L	P	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	E	T	P	Q	D	I	I	K	N	A	R	S	F	G	W	D	L	A	K	L	V
Template Known Secondary structure									T	T					T	T	S	S			T	T	S							S	T	T	S	S																									S	S	S										G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	A	L	A	N	T	I	V	V	V	A	T	A	S	E	S	A	A	L	Q	Y	L	A	P	Y	A	G	C	A	M	G	E	Y	F	R	D	R	G	E	D	A	L	I	I	Y	D	D	L	S	K	Q	A	V	A	Y	R	Q	I	S	L	L	L	R	R	P	P	G	R	E	A	F	P	G	D	V	F	Y	L	H
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	F	Q	Q	Y	D	A	S	S	V	V	R	R	E	L
Template Known Secondary structure			T	T	S										S	S			S			S	S																		T		S							S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	T	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.															.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	L	E	R	A	A	R	V	N	A	E	Y	V	E	A	F	T	K	G	E	V	K	G	K	T	G	S	L	T	A	L	P	I	I	E	T	Q	A	G	D	V	S	A	F	V	P	T	N	V	I	S	I	T	D	G	Q	I	F	L	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	L	V	A	R	L	K	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F	V	S	D	N	V	V	I	L	R
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S	S	S	S	S		S	S	T	T	S							S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.																			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions