Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABB0
Confidence97.63%DateThu Jan 5 11:15:04 GMT 2012
Rank60Aligned Residues116
% Identity18%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150........ .160.........170.........180......... 190.........200 .........210...
Predicted Secondary structure 



..













......




..

Query SS confidence 














. .






























. . . . . .










. .












Query Sequence  QPVQTGYKAVDSMIP. . IGRGQRELIIGDRQTGKTALAIDAIINQRDS. . . . . . GIKCIYVAIGQ. . KASTISNVVRKLE
Query Conservation 


 






 
 
..





  
 
  
 


 
    
  
   ......    


 


..
  

 
    
 
Alig confidence 














..






























......










..












Template Conservation    
 

   

 

 


  
 
  
 
 

 


 
   

   
           
     
      

        
Template Sequence  ICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFG
Template Known Secondary structure 


S
TSSSSSSTTSSTTS
TTTT

SSSSS


GGGGT
Template Predicted Secondary structure 





































Template SS confidence 















































































   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   214.....220.........230.........240.........250.........260....
Predicted Secondary structure 


















Query SS confidence 


















































Query Sequence  EHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLS
Query Conservation         



 


      
  
   
 







 
  



 



Alig confidence 























.....





















Template Conservation           
              .....
  
          






 
Template Sequence  LDPDDALNNVAYARAYNADHQLRL. . . . . LDAAAQMMSESRFSLIVVDSVM
Template Known Secondary structure 

GGG

STT.....TS

TT
Template Predicted Secondary structure 










.....




Template SS confidence 


















































   238.240.........250.........260. ........270.........280...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions