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Job Description | P0ABB0 | Confidence | 93.65% | Date | Thu Jan 5 11:15:04 GMT 2012 |
Rank | 115 | Aligned Residues | 70 |
% Identity | 20% | Template | c1nsfA_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor; |
PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
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Resolution | 1.90 Å |
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165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | L | I | I | G | D | R | Q | T | G | K | T | A | L | A | I | D | A | I | I | N | Q | R | D | S | G | I | K | C | I | Y | V | A | I | G | Q | K | A | S | T | I | S | N | V | V | R | K | L | E | E | H | G | A | L | A | N | T | I | V | V | V | A | T | A | S | E | S | A | A | L | Q | Y | L | A | P | Y | A | G | C | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | L | L | E | G | P | P | H | S | G | K | T | A | L | A | A | K | . |
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S | N | F | P | F | I | K | I | C | S | P | D | K | M | I | G | F | S | E | T | A | K | C | Q | A | M | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | |
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560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
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245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | G | E | Y | F | R | D | R | G | E | D | A | L | I | I | Y | D | D | L | S | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | I | F | D | D | A | Y | K | S | Q | L | S | C | V | V | V | D | D | I | E | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
587 | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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