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Job DescriptionP39282
Confidence98.64%DateThu Jan 5 11:58:52 GMT 2012
Rank6Aligned Residues453
% Identity15%Templated2a65a1
SCOP infoSNF-like SNF-like SNF-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20....... ..30.........40.........50.........60.........70.......
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Query Sequence  SLIGLILMIFTSVFGFANS. . . . PSAYYLMGYSAIPFYIFSALLFFIPFALMMAEMGAAYRKEEGGIYSWMNN. . . . . . .
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Template Sequence  TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIP. . LMWIEWAMGRYGGAQGHGTTPAIFYLLWRN
Template Known Secondary structure 
SSTTTTT..TTT

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   10.........20.........30.........40.........50....... ..60.........70.........80.......
 
   78.80.........90.........100.........110.........120. ........130....
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Query Sequence  SVGPRFAFIGTFMWFSSYIIWMVSTSAKVWVPFSTFLYGSDMTQ. . . . . . . . . . . . . . . . . . . . . . . HWRIAGLEPTQVV
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Template Sequence  RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPTDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAY
Template Known Secondary structure  TT








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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  GLLAVAWMILVTVVASKGINKIARITAVGGIAVMCLNLVLLLVSITILLLNGGHFAQDINFLASPNPGYQSGLAMLSFVV
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Template Sequence  IVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVG
Template Known Secondary structure  TT
TTTTTT
TTS

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   170.........180.........190.........200.........210.........220.........230.........240.........
 
   215....220 .........230.........240.........250.... .....260.........270.........280........
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Query Sequence  FAIFAY. GGIEAVGGLVDKTENPEKNFAKGIVFAAIVISIG. . . . . YSLAIFLWGVSTNWQQVLSNGSVNLGNITYVLMK
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Template Sequence  QIFFTLSLGFGAIITYASYVRK. DQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLP
Template Known Secondary structure  TTTSSTTS
T.TS

TT

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   250.........260.........270. ........280.........290.........300.........310.........320........
 
   289290.........300.........310.........320.........330.........340.........350.........360........
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Query Sequence  SLGMTLGNALHLSPEASLSLGVWFARITGLSMFLAYTGAFFTLCYSPLKAIIQGTPKALWPEPMTRLNAMGMPSIAMWMQ
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Template Sequence  AIFSQTA. . . . . . . . . . . . . . . . GGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDEL. . . . . . . . . . KLSRKHAVLWT
Template Known Secondary structure  TTST................TTS..........


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   329330..... ....340.........350.........360.........370. ........380..
 
   369370.........380.........390.........400.........410... ......420.........430..... ....440....
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Query Sequence  CGLVTVFILLVSFGGGTASAFFNKLTLMANVSMTLPYLFLALAFP. . . FFKARQDLDRPFVIFKTHLSAM. IATVVVVLV
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Template Sequence  AAIVFFSAHLVMFLNKSLDEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAV
Template Known Secondary structure  BTTTTTTTS
TT
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TT
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   383......390.........400.........410.........420.........430.........440.........450.........460..
 
   445....450.........460.........470.........480.........490
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Query Sequence  VTFANVFTIIQPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSR
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Template Sequence  LLVVWAREYIPKIMEETHWTVWITRFYIIGLFLFLTFLVFLAERRR
Template Known Secondary structure  TSS
TT
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   463......470.........480.........490.........500........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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