Job Description P39282 Confidence 1.90% Date Thu Jan 5 11:58:52 GMT 2012 Rank 36 Aligned Residues 82 % Identity 15% Template d1s7ba_ SCOP info Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE Resolution 3.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	L	P	Y	L	F	L	A	L	A	F	P	F	F	K	A	R	Q	D	L	D	R	P	F	V	I	F	K	T	H	L	S	A	M	I	A	T	V	V	V	V	L	V	V	T	F	A	N	V	F	T	I	I	Q	P	V	V	E	A	G	D	W	D	S	T	L	W	M	I	G	G	P	V	F	F	S	L	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	G	G	A	I	L	A	E	V	I	G	T	T	L	M	K	F	S	E	G	F	T	R	L	W	P	S	.	.	.	.	.	.	.	.	.	.	.	V	G	T	I	I	C	Y	C	A	S	F	W	L	L	A	Q	T	L	A	Y	I	P	T	G	I	A	Y	A	I	W	S	G	V	G	I	V	L	I	S	L	L
Template Known Secondary structure																										S	S		S	.	.	.	.	.	.	.	.	.	.	.	S																			S	S		S		S	S		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	I	Y	Q	N	Y	C	S	R	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	G	F	F	G	Q	R	L	D	L	P	A
Template Known Secondary structure		T			S					T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions