Return to main results Retrieve Phyre Job Id

Job DescriptionP39282
Confidence0.94%DateThu Jan 5 11:58:52 GMT 2012
Rank78Aligned Residues16
% Identity19%Templatec3kdvB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna damage response b protein; PDBTitle: crystal structure of dna damage response b (ddrb) from deinococcus2 geothermalis
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   484.....490.........
Predicted Secondary structure 








Query SS confidence 















Query Sequence  YQNYCSRVAKNPQWAV
Query Conservation       
   
 
    
Alig confidence 















Template Conservation 








  




Template Sequence  WSLIGARKWTNPEGEE
Template Known Secondary structure  GGGGT
SSS
Template Predicted Secondary structure 








Template SS confidence 















   58.60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions