Job Description P39282 Confidence 1.98% Date Thu Jan 5 11:58:52 GMT 2012 Rank 32 Aligned Residues 254 % Identity 7% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	N	F	A	K	G	I	V	F	A	A	I	V	I	S	I	G	Y	S	L	A	I	F	L	W	G	V	S	T	N	W	Q	Q	V	L	S	N	G	S	V	N	L	G	N	I	T	Y	V	L	M	K	S	L	G	M	T	L	G	N	A	L	H	L	S	P	E	A	S	L	S	L	G	V	W	F	A	R	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	V	S	P	I	Q	L	L	I	M	T	F	F	Q	V	T	L	F	A	V	N	E	F	I	L	L	N	L	L	K	V	K	D	A	G	G	S	M	T	I	H	T	F	G	A	Y	F	G	L	T	V	T	R	I	L	Y	R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I
Template Known Secondary structure		T	S	S																									T	T	S					T	T		T	T	T	T															T			T	T	G	G	G	G	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																								.																						.
Query SS confidence																			.	.	.	.	.	.	.	.																								.																						.
Query Sequence		G	L	S	M	F	L	A	Y	T	G	A	F	F	T	L	C	Y	.	.	.	.	.	.	.	.	S	P	L	K	A	I	I	Q	G	T	P	K	A	L	W	P	E	P	M	T	R	L	N	.	A	M	G	M	P	S	I	A	M	W	M	Q	C	G	L	V	T	V	F	I	L	.	L	V	S	F	G	G	G	T	A
Query Conservation																			.	.	.	.	.	.	.	.																								.																						.
Alig confidence																			.	.	.	.	.	.	.	.																								.																						.
Template Conservation
Template Sequence		G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P
Template Known Secondary structure														T	T	T	T		S	S																													T	S	T	T											G	G	G						T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	F	N	K	L	T	L	M	A	N	V	S	M	T	L	P	Y	L	F	L	A	L	A	F	P	F	F	K	A	R	Q	D	L	D	R	P	F	V	I	F	K	T	H	L	S	A	M	I	A	T	V	V	V	V	L	V	V	T	F	A	N	V	F	T	I	I	Q	P	V	V	E	A	G	D	W	D	S	T
Query Conservation
Alig confidence					.	.	.	.																																				.	.	.	.	.	.
Template Conservation					.	.	.	.																																				.	.	.	.	.	.
Template Sequence		Y	G	A	.	.	.	.	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	.	.	.	.	.	.	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I
Template Known Secondary structure					.	.	.	.																															T	T				.	.	.	.	.	.			T
Template Predicted Secondary structure					.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		304	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	M	I	G	G	P	V	F	F	S	L	L	A	M	A	I	Y	Q	N	Y	C	S	R	V	A	K	N	P	Q	W	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C
Template Known Secondary structure																							T	S	T	T	S					T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions