Return to main results Retrieve Phyre Job Id

Job DescriptionP39282
Confidence1.20%DateThu Jan 5 11:58:52 GMT 2012
Rank64Aligned Residues43
% Identity12%Templatec2rmzA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin beta-3; PDBTitle: bicelle-embedded integrin beta3 transmembrane segment
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   455....460.........470.........480.........490.......
Predicted Secondary structure 














Query SS confidence 










































Query Sequence  QPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRVAKNPQW
Query Conservation                 
   
              
   
 
  
Alig confidence 










































Template Conservation 



   

  

 


  





  






  
 




Template Sequence  PESPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEF
Template Known Secondary structure 







S



Template Predicted Secondary structure 









Template SS confidence 










































   685....690.........700.........710.........720.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions