 |
Job Description | P39282 | Confidence | 1.37% | Date | Thu Jan 5 11:58:52 GMT 2012 |
Rank | 52 | Aligned Residues | 26 |
% Identity | 8% | Template | c1ceuA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:protein (hiv-1 regulatory protein n-terminal |
PDBTitle: nmr structure of the (1-51) n-terminal domain of the hiv-12 regulatory protein
|
Resolution | UNK |
|
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | |
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | V | G | G | L | V | D | K | T | E | . |
N | P | E | K | N | F | A | K | G | I | V | F | A | A | I |
Query Conservation |   |
|   |   |   |   |   |
|   |
|   |   | . |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|   |
Template Sequence |   |
D | W | T | L | E | L | L | E | E | L | K | N | E | A | V | R | H | F | P | R | I | W | L | H | S | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|