Job Description P23842 Confidence 87.88% Date Thu Jan 5 11:39:48 GMT 2012 Rank 42 Aligned Residues 99 % Identity 17% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	A	E	S	S	M	Y	N	I	E	Q	L	H	K	F	G	F	R	I	A	I	D	D	F	G	T	G	Y	A	N	Y	E	R	L	K	R	L	Q	A	D	I	I	K	I	D	G	V	F	V	K	D	I	V	T	N	T	L	D	A	M	I	V	R	S	I	T	D	L	A	K	A	K	S	L	S	V	V	A	E
Query Conservation
Alig confidence																								.	.																										.	.	.	.	.															.	.
Template Conservation																								.	.																										.	.	.	.	.															.	.
Template Sequence		D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	.	.	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	.	.	.	.	.	P	G	M	N	G	I	D	V	C	R	V	L	R	A	.	.	D	S	G	V	P	I	V	M	L	T
Template Known Secondary structure		S															T	T						.	.				G	G	G											S						S	S		.	.	.	.	.	S	S	S												.	.
Template Predicted Secondary structure																								.	.																										.	.	.	.	.															.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	T	Q	Q	Q	Q	A	L	L	H	K	L	G	V	Q	Y	L	Q	G	Y	L	I	G	R	P	Q	P	L	A	D
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	.	.	.	.	Y	I	M	K	P	F	K	P	K	E
Template Known Secondary structure			T	T		S	S								T	T				.	.	.	.					S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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