Return to main results Retrieve Phyre Job Id

Job DescriptionP23842
Confidence55.70%DateThu Jan 5 11:39:48 GMT 2012
Rank210Aligned Residues98
% Identity9%Templatec3nhmA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of a response regulator from myxococcus xanthus
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   616...620.........630.........640.........650.........660.........670.........680.........690.....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  AFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVV
Query Conservation                
   
    




 
  
   
     
 



   
               
   
       
Alig confidence 























..





















.....


























Template Conservation 




      
   
  
  
  ..
     

        



 
.....  
    
      
        
 

Template Sequence  IVENSWTXRETLRLLLSGEFDCTT. . AADGASGLQQALAHPPDVLISD. . . . . VNXDGXDGYALCGHFRSEPTLKHIPVI
Template Known Secondary structure 
S
TTTS..SSS

S
.....SS
SSS
STTTTT

Template Predicted Secondary structure 





..







.....














Template SS confidence 















































































   23......30.........40...... ...50.........60........ .70.........80.........90.....
 
   696...700.........710.........720.........
Predicted Secondary structure 


















Query SS confidence 

































Query Sequence  AEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD
Query Conservation 




       
   
    

     
 
   
Alig confidence 








.....




....










Template Conservation    
      .....  
  ....  
 

     
Template Sequence  FVSGYAPAD. . . . . QPVPD. . . . AYLVKPVKPPV
Template Known Secondary structure  S


TT.....S


S....SS

Template Predicted Secondary structure 

.....

....




Template SS confidence 

































   96...100.... ..... 110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions