 |
Job Description | P23842 | Confidence | 67.56% | Date | Thu Jan 5 11:39:48 GMT 2012 |
Rank | 163 | Aligned Residues | 93 |
% Identity | 5% | Template | c3mr7B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:adenylate/guanylate cyclase/hydrolase, alpha/beta fold |
PDBTitle: crystal structure of adenylate/guanylate cyclase/hydrolase from2 silicibacter pomeroyi
|
Resolution | 2.60 Å |
|
 |
  |   |
351 | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | |
. | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | C | C | L | R | I | D | N | L | E | F | M | S | R | H | Y | G | L | M | M | R | V | H | C | I | R | S | I | C | R | T | L | L | P | L | M | Q | E | N | E | . |
K | L | Y | Q | L | P | G | S | E | L | L | L | V | L | S | G | P | E | T | E | G | R | L | Q | H | M | V | N | I | L | N | S | R | Q | I | H | W | N |
Query Conservation |   |
  |
|   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | I | L | A | A | D | X | A | G | Y | S | R | L | X | E | R | N | E | T | D | V | L | N | R | Q | K | L | Y | R | R | E | L | I | D | P | A | I | A | Q | A | G | G | Q | I | V | K | T | T | G | D | G | X | L | A | R | F | D | T | A | Q | A | A | L | R | C | A | L | E | I | Q | Q | A | X | Q | Q | R | E | E | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | G | L | D | M | G | Y | G | A | A | W | G | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
P | R | K | E | R | I | Q | Y | R | I | G | I | N | I |
Template Known Secondary structure |   |
| G | G | G |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|